Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887588.1_cds_XP_016441984.1_37293
CDS Infomation

[gene=LOC107767488] [db_xref=GeneID:107767488] [protein=rRNA methyltransferase 1, mitochondrial-like] [protein_id=XP_016441984.1] [location=complement(141063..142622)] [gbkey=CDS]
Sequence

ATGCTAAAGCAATTTCACACTTCAAAGCCACAGTCTTTACTAGTTGTATGCCATCCAATA
ATTCTAAAGCACCATTTCAAGTTGACATCTTTGAGTATTTCTAATGGTATCTGCAAGAAA
TCCCAAACCCATGATTTGAATCGCTTATTAAGCCCCAGAAATTTAGTCCCTTTCAGCACT
AAACCACCTTCTAAAAATTTGAACTTGGATATATCTGTGAATTTTTCATGTGGATTTCAC
CCAAAATATCGTCTTGGTAACTACTGTTTAATTACTGCTAGAAGTTATTCAGCTTCGGAT
TATGGGAAAATAGCAGAAGGCAGTGAAAGGAATCTTCCTTGGCTTGCAAAAGATAAAGCT
AAACAAACTAAGAGAAATGAAAAAGTTGTTATAAGCCGATCTTCGTGGGAGGAATCGGCT
GAGAAGTTCTTAAAAGATGGTCGTTCTGCTGTGAAAAGTGCAGAATTCAAGAGATATGAG
GATAGACGAGACGATTATCAGGGAAATACTTATAGTGGTGAAGGAGAAGACGATGAGGGA
GATATGGAGGAAGTTGATGATCCAAGGTGGGATAAGATTAAGAACACGTTCAATCGGATT
AAGGTAAGACCGGGGTCTGATAGGCCGGAGGTTAGAAGGTGGAACAATCAAGATAGTTGG
GGTAAAAAGACATGGAAAGAGGCAACTGAATCAACCATACCACGAATGATTGGCGAGGGA
ATTTATGGGGTTGGCCCTGTTTTGGCTGCATTGTCTGCGGGAAGAAGGGAATTTTATTCT
CTGTATATACAGGAAGGATTGGATTTGAGTGGGAATAACCGGAAAAAGAAGGATAAGAAA
GGGTTTGAAAGAGTTTTGAGGATGGCGGAAAAAGTAGGATTGAGTAAAAAGGAGGTATCT
AAACATGACCTCAATATGTTTGCTGATAACAGGCCTCATCAGGGACTGGTCCTCGATGTG
TCTCCATTGGAAATGGTTGGTATCAAGGAGTTGGAACCTGTTTCAACTGAGGAAGAGAGC
ACTCCTCTTTGGGTAGCTTTGGATGAGGTTACTGATCCTCAGAATTTGGGGGCAATTATA
CGGTCTGCTTACTTTTTTGGAGCTGCAGGGATTGTCTTGTGTGCTAAGAACTCTGCACCG
TTGAGTGGGGTAGTGAGCAAAGCAAGTGCCGGTTCACTTGAATTAGTGGAGTTGAGGTCT
TGCAAGAATATGATGCAATTCCTAAAGTCTTCAGCAGAAAATGGATGGCGGGTCATAGGT
GGATCTGTTTCTTCAAGAGCTGTTCCATTGCGTGAGATTGTGCCTGGTGCTCCTACAATC
CTTGTTTTGGGAAGTGAGGGCACTGGTCTGAGGCCGTTGGTGGAGAGATCTTGTACTCAG
TTAGTTAAAATTCCAGGAAACATCCCCGTGGATATAATTGTCGGAGAAGACGAAGATGAT
CATAGTTCGTCAGGTCAGAACTTTAGGTCCTTCATGGCTGTGGAAAGCTTGAATGTAAGT
GTAGCAGCAGGTGTGCTTCTTCATCACTTGATTGCCAGCAATTGTAGCAAAAACAACTAA

Peptide Sequence

PEP ID

XP_016441984.1
PEP Infomation

PREDICTED: rRNA methyltransferase 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MLKQFHTSKPQSLLVVCHPIILKHHFKLTSLSISNGICKKSQTHDLNRLLSPRNLVPFST
KPPSKNLNLDISVNFSCGFHPKYRLGNYCLITARSYSASDYGKIAEGSERNLPWLAKDKA
KQTKRNEKVVISRSSWEESAEKFLKDGRSAVKSAEFKRYEDRRDDYQGNTYSGEGEDDEG
DMEEVDDPRWDKIKNTFNRIKVRPGSDRPEVRRWNNQDSWGKKTWKEATESTIPRMIGEG
IYGVGPVLAALSAGRREFYSLYIQEGLDLSGNNRKKKDKKGFERVLRMAEKVGLSKKEVS
KHDLNMFADNRPHQGLVLDVSPLEMVGIKELEPVSTEEESTPLWVALDEVTDPQNLGAII
RSAYFFGAAGIVLCAKNSAPLSGVVSKASAGSLELVELRSCKNMMQFLKSSAENGWRVIG
GSVSSRAVPLREIVPGAPTILVLGSEGTGLRPLVERSCTQLVKIPGNIPVDIIVGEDEDD
HSSSGQNFRSFMAVESLNVSVAAGVLLHHLIASNCSKNN

Transcript Sequence

Gene sequence data has not been registered.